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[ARTICLE · art-87093] src=arxiv.org ↗ pub= topic=machine-learning verified=true sentiment=· neutral

GeoID-PINN: Identifiability-Aware Regional Epidemic Inference with Geographic Coupling

Researchers introduced GeoID-PINN, a physics-informed neural network for regional epidemic inference, which in a four-region simulation achieved source-composition error 0.099 with a compatible distance prior, versus 0.577 under a misspecified prior. In retrospective COVID-19 data from 64 Louisiana counties, Forecast-Trained Geo-PINN reduced MSE from 32,957 to 11,468 and MAE from 70.60 to 57.73 relative to an autoregressive negative-binomial baseline, though the baseline had lower NLL (5.158 vs 5.346). The study highlights that accurate trajectory fits do not guarantee recovery of regional dependence structure.

read1 min views1 publishedAug 5, 2026

arXiv:2608.02633v1 Announce Type: new Abstract: Regional surveillance data reflect local transmission, reporting, seeding, and external infection pressure, which are difficult to identify separately. We introduce GeoID-PINN, a physics-informed neural network (PINN) for susceptible-infectious-recovered-deceased (SIRD) dynamics. The model represents spatial dependence with a row-stochastic source-composition matrix whose rows assign nonnegative source weights that sum to one. We regularize this matrix toward a spatial prior constructed from distance, adjacency, commuting, or lead-lag information. In a four-region simulation with known truth, a compatible distance prior gives source-composition error 0.099. The error rises to 0.159 without regularization and 0.577 under a strongly misspecified prior, while trajectory fit and transmission-scale estimates remain similar. Accurate trajectories therefore do not guarantee recovery of the regional dependence structure. We also evaluate GeoID-PINN retrospectively using COVID-19 data from 64 Louisiana counties. Relative to an autoregressive negative-binomial baseline, Forecast-Trained Geo-PINN reduces mean squared error (MSE) from 32,957 to 11,468 and mean absolute error (MAE) from 70.60 to 57.73. The baseline has lower negative log likelihood (NLL), 5.158 versus 5.346, indicating better distributional fit but worse point accuracy. In a controlled 15-county comparison, county adjacency reduces MSE by 6.85 percent and MAE by 3.1 percent. Similar performance across plausible priors supports structured regularization but not unique edge recovery. These results require prior-sensitivity and observation-model checks before interpretation.

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