Does code cleanliness affect coding agents? A controlled minimal-pair study

A new study by researchers using Claude Code found that code cleanliness does not affect coding agents' task pass rates but reduces token usage by 7-8% and file revisitations by 34%, suggesting maintainability principles remain relevant in AI-driven development.

Computer Science Software Engineering Submitted on 19 May 2026 Title:Does Code Cleanliness Affect Coding Agents? A Controlled Minimal-Pair Study View PDF /pdf/2605.20049 HTML experimental https://arxiv.org/html/2605.20049v1 Abstract:As autonomous coding agents see rapid adoption, their evaluation has primarily focused on task completion rates holding the target codebase fixed. This leaves a critical question unanswered: does the structural and stylistic quality, or cleanliness'' of the underlying code affect an agent's ability to navigate and modify it? To isolate the effect of code cleanliness from agent capability, we introduce an evaluation protocol built around minimal pairs: repositories that match on architecture, dependencies, and external behaviour, but differ on static-analysis rule violations and cognitive complexity. The pairs are constructed in both directions, by agent pipelines that either degrade a clean repository or clean a messy one. We author 33 tasks across six such pairs, evaluated through hidden tests at the application's public surface. Across 660 trials with Claude Code, code cleanliness does not change the agent's pass rate. However, it substantially alters the agent's operational footprint: agents working on cleaner code use 7 to 8% fewer tokens and reduce file revisitations by 34%. Our findings suggest that traditional maintainability principles remain highly relevant in the era of AI-driven development, shaping the computational cost and navigational efficiency of coding agents. Code cleanliness joins model choice, harness, and prompting as a factor that materially affects agent behaviours. Submission history From: Priyansh Trivedi view email /show-email/e2ac6fbd/2605.20049 v1 Tue, 19 May 2026 16:06:26 UTC 1,094 KB References & Citations Loading... Bibliographic and Citation Tools Bibliographic Explorer What is the Explorer? https://info.arxiv.org/labs/showcase.html arxiv-bibliographic-explorer Connected Papers What is Connected Papers? https://www.connectedpapers.com/about Litmaps What is Litmaps? https://www.litmaps.co/ scite Smart Citations What are Smart Citations? https://www.scite.ai/ Code, Data and Media Associated with this Article alphaXiv What is alphaXiv? https://alphaxiv.org/ CatalyzeX Code Finder for Papers What is CatalyzeX? https://www.catalyzex.com DagsHub What is DagsHub? https://dagshub.com/ Gotit.pub What is GotitPub? http://gotit.pub/faq Hugging Face What is Huggingface? https://huggingface.co/huggingface ScienceCast What is ScienceCast? https://sciencecast.org/welcome Demos Recommenders and Search Tools Influence Flower What are Influence Flowers? https://influencemap.cmlab.dev/ CORE Recommender What is CORE? https://core.ac.uk/services/recommender arXivLabs: experimental projects with community collaborators arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website. Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them. Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs https://info.arxiv.org/labs/index.html .